Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_3022PFAM: polysaccharide export protein; KEGG: rle:pRL110389 putative exopolysaccharide production protein. (451 aa)    
Predicted Functional Partners:
Mnod_4355
PFAM: lipopolysaccharide biosynthesis protein; KEGG: mex:Mext_4589 lipopolysaccharide biosynthesis protein.
 
 
 0.945
Mnod_5599
PFAM: lipopolysaccharide biosynthesis protein; KEGG: mex:Mext_4129 lipopolysaccharide biosynthesis protein.
 
 
 0.929
Mnod_5885
PFAM: lipopolysaccharide biosynthesis protein; KEGG: bra:BRADO7056 putative exopolysaccharide biosynthesis protein.
 
 
 0.918
Mnod_5886
PFAM: lipopolysaccharide biosynthesis protein; KEGG: bra:BRADO7056 putative exopolysaccharide biosynthesis protein.
 
 
 0.901
Mnod_5214
PFAM: lipopolysaccharide biosynthesis protein; KEGG: met:M446_2958 lipopolysaccharide biosynthesis protein.
 
 
 0.898
Mnod_0861
PFAM: lipopolysaccharide biosynthesis protein; KEGG: mpo:Mpop_3538 lipopolysaccharide biosynthesis protein.
 
 
 0.890
Mnod_3177
KEGG: met:M446_4029 hypothetical protein.
 
 
 0.878
Mnod_5211
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: met:M446_2955 undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.840
Mnod_3021
KEGG: xau:Xaut_1952 hypothetical protein; Belongs to the glycosyl hydrolase 18 family.
       0.773
Mnod_3023
PFAM: glycosyl transferase family 2; polysaccharide deacetylase; chitin synthase; KEGG: cak:Caul_0228 polysaccharide deacetylase.
 
   
 0.755
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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