Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_3075PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xau:Xaut_2807 short-chain dehydrogenase/reductase SDR. (261 aa)    
Predicted Functional Partners:
Mnod_3072
KEGG: atc:AGR_L_914GM hypothetical protein.
 
    0.811
Mnod_3073
KEGG: atc:AGR_L_130 hypothetical protein.
 
    0.805
Mnod_3074
KEGG: smd:Smed_1693 transferase hexapeptide repeat containing protein.
       0.757
Mnod_3076
PFAM: AMP-dependent synthetase and ligase; KEGG: mrd:Mrad2831_3008 AMP-dependent synthetase and ligase.
 
   0.649
Mnod_3077
PFAM: Thiolase; KEGG: mrd:Mrad2831_0689 propanoyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
   0.621
dld
D-lactate dehydrogenase membrane binding; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family.
   
   0.588
Mnod_3070
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_2408 short-chain dehydrogenase/reductase SDR.
 
    
0.584
Mnod_7667
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: met:M446_6955 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.575
Mnod_3078
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bbt:BBta_4095 TRAP-type C4-dicarboxylate transporter small and large permease.
  
 
  0.519
Mnod_1945
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: met:M446_0317 beta-ketoacyl synthase.
  
 
 0.510
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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