Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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Mnod_3084Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb20683 putative transcriptional regulator, LysR family protein. (296 aa)    
Predicted Functional Partners:
Mnod_0485
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_1695 LysR family transcriptional regulator.
  
     0.733
Mnod_0318
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_2283 LysR family transcriptional regulator.
  
     0.706
Mnod_0888
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpc:RPC_3079 transcriptional regulator, LysR family.
  
     0.706
Mnod_7619
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_1079 transcriptional regulator.
  
     0.703
Mnod_2713
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_1079 transcriptional regulator.
  
     0.702
Mnod_7267
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_6020 LysR family transcriptional regulator.
  
     0.701
Mnod_1715
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_4808 LysR family transcriptional regulator.
  
     0.698
Mnod_7247
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_6037 LysR family transcriptional regulator.
  
     0.692
Mnod_3430
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppw:PputW619_1696 LysR family transcriptional regulator.
  
     0.687
Mnod_3454
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01817 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.641
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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