STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_3089TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: lch:Lcho_1133 2-hydroxy-3-oxopropionate reductase. (297 aa)    
Predicted Functional Partners:
Mnod_3087
TIGRFAM: glyoxylate carboligase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bte:BTH_I2173 glyoxylate carboligase; Belongs to the TPP enzyme family.
 
 
 0.988
Mnod_3088
TIGRFAM: hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: azo:azo1163 putative hydroxypyruvate isomerase; Belongs to the hyi family.
 
 0.984
Mnod_0654
PFAM: MOFRL domain protein; KEGG: mpo:Mpop_4659 hydroxypyruvate reductase.
 
 
 0.920
Mnod_5964
PFAM: MOFRL domain protein; KEGG: met:M446_5205 hydroxypyruvate reductase.
 
 
 0.920
Mnod_6898
PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: met:M446_0565 6-phosphogluconate dehydrogenase NAD-binding.
  
  
 
0.910
Mnod_0378
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: met:M446_2232 glyoxylate reductase.
    
 0.907
Mnod_7113
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: met:M446_6553 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding.
    
 0.907
Mnod_1511
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: met:M446_0667 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding.
    
  0.901
Mnod_2906
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mlo:mll7048 dehydrogenase.
    
  0.901
Mnod_7094
TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: met:M446_6206 2-hydroxy-3-oxopropionate reductase.
  
  
 
0.901
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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