STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_3116PFAM: Hydantoinase B/oxoprolinase; KEGG: met:M446_4696 5-oxoprolinase (ATP-hydrolyzing). (548 aa)    
Predicted Functional Partners:
Mnod_1245
PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: met:M446_1980 5-oxoprolinase (ATP-hydrolyzing).
 0.999
Mnod_3115
PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: met:M446_4697 5-oxoprolinase (ATP-hydrolyzing).
 0.999
Mnod_3416
PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: oan:Oant_4581 5-oxoprolinase (ATP-hydrolyzing).
 0.999
Mnod_1246
Hydantoinase B/oxoprolinase; PFAM: molybdopterin dehydrogenase FAD-binding; Hydantoinase B/oxoprolinase; CO dehydrogenase flavoprotein domain protein; KEGG: met:M446_1981 5-oxoprolinase (ATP-hydrolyzing).
 
  
 
0.924
Mnod_3415
PFAM: Hydantoinase B/oxoprolinase; KEGG: oan:Oant_4582 5-oxoprolinase (ATP-hydrolyzing).
  
  
 
0.918
Mnod_3117
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ade:Adeh_2212 LysR family transcriptional regulator.
       0.542
Mnod_3114
PFAM: Extracellular ligand-binding receptor; KEGG: met:M446_4698 extracellular ligand-binding receptor.
       0.433
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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