STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_3155TIGRFAM: holo-ACP synthase, malonate decarboxylase-specific; KEGG: met:M446_6853 hypothetical protein. (218 aa)    
Predicted Functional Partners:
mdcB
triphosphoribosyl-dephospho-CoA synthase MdcB; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.
 
  
  0.976
Mnod_3152
TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase delta subunit; KEGG: met:M446_6856 malonate decarboxylase acyl carrier protein.
 
     0.965
Mnod_3154
TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: met:M446_6854 malonate decarboxylase, gamma subunit.
 
     0.965
Mnod_3153
TIGRFAM: malonate decarboxylase, beta subunit; KEGG: mex:Mext_0026 malonate decarboxylase subunit beta.
 
     0.964
Mnod_3151
TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: met:M446_6857 malonate decarboxylase, alpha subunit.
 
     0.957
Mnod_3157
KEGG: met:M446_6851 acyl transferase domain-containing protein.
 
   
 0.957
Mnod_3149
TIGRFAM: malonate transporter, MadM subunit; PFAM: malonate/sodium symporter MadM subunit; KEGG: met:M446_6859 malonate transporter, MadM subunit.
 
     0.772
Mnod_3150
TIGRFAM: malonate transporter, MadL subunit; PFAM: malonate transporter MadL subunit; KEGG: met:M446_6858 malonate transporter, MadL subunit.
 
     0.767
Mnod_3728
KEGG: met:M446_4659 hypothetical protein.
  
     0.551
Mnod_6006
PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: met:M446_5782 triphosphoribosyl-dephospho-CoA protein.
    
  0.538
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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