STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mdcBtriphosphoribosyl-dephospho-CoA synthase MdcB; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family. (287 aa)    
Predicted Functional Partners:
Mnod_3152
TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase delta subunit; KEGG: met:M446_6856 malonate decarboxylase acyl carrier protein.
 
  
 0.991
Mnod_3155
TIGRFAM: holo-ACP synthase, malonate decarboxylase-specific; KEGG: met:M446_6853 hypothetical protein.
 
  
  0.976
Mnod_3153
TIGRFAM: malonate decarboxylase, beta subunit; KEGG: mex:Mext_0026 malonate decarboxylase subunit beta.
 
  
 0.973
Mnod_3151
TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: met:M446_6857 malonate decarboxylase, alpha subunit.
 
  
 0.970
Mnod_3154
TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: met:M446_6854 malonate decarboxylase, gamma subunit.
 
     0.956
Mnod_3150
TIGRFAM: malonate transporter, MadL subunit; PFAM: malonate transporter MadL subunit; KEGG: met:M446_6858 malonate transporter, MadL subunit.
 
    0.936
Mnod_3157
KEGG: met:M446_6851 acyl transferase domain-containing protein.
 
    0.936
Mnod_0293
PFAM: HpcH/HpaI aldolase; KEGG: met:M446_2314 citrate (pro-3S)-lyase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.872
Mnod_5949
PFAM: HpcH/HpaI aldolase; KEGG: met:M446_5220 citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.868
Mnod_7119
PFAM: HpcH/HpaI aldolase; KEGG: met:M446_6559 citrate (pro-3S)-lyase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.822
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.