Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Mnod_3166Hypothetical protein; KEGG: met:M446_5531 transposase. (184 aa)    
Predicted Functional Partners:
Mnod_0853
KEGG: met:M446_5532 hypothetical protein.
  
     0.774
Mnod_7603
KEGG: mrd:Mrad2831_6371 hypothetical protein.
 
     0.710
Mnod_6305
KEGG: rle:pRL70142 hypothetical protein.
  
    0.684
Mnod_4312
KEGG: met:M446_1477 hypothetical protein.
  
     0.643
Mnod_2977
KEGG: rca:Rcas_3465 hypothetical protein.
  
     0.623
Mnod_4327
KEGG: oan:Oant_0704 integrase catalytic region.
  
     0.616
Mnod_2879
PFAM: type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: met:M446_3690 type III restriction protein res subunit.
  
     0.578
Mnod_5894
KEGG: met:M446_5096 DoxX family protein.
  
     0.549
Mnod_3167
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: met:M446_4036 Crp/FNR family transcriptional regulator.
       0.454
Mnod_4313
KEGG: met:M446_1476 putative transposase protein.
  
    0.449
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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