Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Mnod_3169PFAM: glycosyl transferase family 2; KEGG: met:M446_4035 glycosyl transferase family protein. (344 aa)    
Predicted Functional Partners:
Mnod_4316
PFAM: glycosyl transferase family 2; KEGG: rbo:A1I_04625 glycosyltransferase.
 
    0.675
Mnod_4345
PFAM: glycosyl transferase family 2; KEGG: rrj:RrIowa_0552 glycosyltransferase.
 
    0.654
Mnod_7037
PFAM: glycosyl transferase family 2; KEGG: gbe:GbCGDNIH1_1141 glycosyltransferase.
 
    0.628
Mnod_3170
PFAM: glycosyl transferase group 1; KEGG: met:M446_4034 glycosyl transferase group 1.
 
    0.567
Mnod_4308
PFAM: glycosyl transferase family 2; KEGG: mex:Mext_3705 glycosyl transferase family protein.
 
    0.565
Mnod_5211
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: met:M446_2955 undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.557
Mnod_1841
PFAM: glycosyl transferase family 2; KEGG: met:M446_4883 glycosyl transferase family protein.
  
     0.462
Mnod_6327
PFAM: glycosyl transferase family 2; KEGG: glo:Glov_1525 glycosyl transferase family 2.
  
     0.460
Mnod_0875
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; KEGG: met:M446_5186 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
  
  
 0.440
Mnod_1185
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; KEGG: met:M446_5186 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
  
  
 0.440
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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