STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_3207KEGG: tbd:Tbd_0914 hypothetical protein. (56 aa)    
Predicted Functional Partners:
Mnod_4883
PFAM: Di-haem cytochrome c peroxidase; KEGG: xau:Xaut_3462 di-haem cytochrome c peroxidase.
  
 
 0.753
Mnod_3208
PFAM: fructose-bisphosphate aldolase class-I; KEGG: bpy:Bphyt_2128 fructose-bisphosphate aldolase.
       0.507
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
 
 0.482
Mnod_3274
KEGG: met:M446_3645 glucose/sorbosone dehydrogenase-like protein.
  
 
 0.462
Mnod_0784
PFAM: blue (type 1) copper domain protein; KEGG: met:M446_4790 blue (type1) copper domain-containing protein.
   
   0.460
Mnod_2695
KEGG: met:M446_6437 hypothetical protein.
   
   0.460
Mnod_1304
KEGG: met:M446_6928 cytochrome c class I.
  
 
 0.429
Mnod_2114
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.429
Mnod_2346
PFAM: cytochrome c class I; KEGG: met:M446_2992 cytochrome c class I.
  
 
 0.429
Mnod_5233
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: met:M446_3273 cytochrome c oxidase, cbb3-type, subunit III.
  
 
 0.429
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.