STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_3235PFAM: monooxygenase FAD-binding; Phenol hydroxylase domain protein dimerisation; KEGG: met:M446_6872 monooxygenase FAD-binding. (634 aa)    
Predicted Functional Partners:
Mnod_0136
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: met:M446_2675 ferredoxin.
   
 
 0.910
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
    
 0.907
Mnod_2710
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mpt:Mpe_A0921 methanesulfonate monooxygenase component; reductase.
     
 0.906
Mnod_0822
PFAM: monooxygenase FAD-binding; Phenol hydroxylase domain protein dimerisation; KEGG: met:M446_6872 monooxygenase FAD-binding.
  
  
 
0.900
Mnod_2709
PFAM: Rieske [2Fe-2S] domain protein; KEGG: bbr:BB0523 putative ferredoxin.
     
 0.900
Mnod_5141
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: met:M446_4513 glyoxalase/bleomycin resistance protein/dioxygenase.
    
 0.821
Mnod_2371
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: met:M446_1327 short-chain dehydrogenase/reductase SDR.
   
 
  0.800
Mnod_3236
Hypothetical protein.
       0.618
Mnod_3237
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: met:M446_6871 major facilitator transporter.
  
    0.545
Mnod_7095
PFAM: HpcH/HpaI aldolase; KEGG: met:M446_6205 2-dehydro-3-deoxyglucarate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
   
 0.507
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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