STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_3244KEGG: hypothetical protein. (145 aa)    
Predicted Functional Partners:
Mnod_4472
PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: met:M446_4538 ethyl tert-butyl ether degradation EthD.
  
     0.735
Mnod_3245
Hypothetical protein; KEGG: rha:RHA1_ro07261 hydrolase.
       0.650
Mnod_2055
KEGG: hypothetical protein.
  
     0.627
Mnod_2264
KEGG: met:M446_5598 hypothetical protein.
  
     0.615
Mnod_2670
KEGG: met:M446_1591 hypothetical protein.
  
     0.577
rhmD
Mandelate racemase/muconate lactonizing protein; Catalyzes the dehydration of L-rhamnonate to 2-keto-3-deoxy- L-rhamnonate (KDR).
  
     0.576
Mnod_5358
PFAM: glycosyl transferase family 28; KEGG: met:M446_5051 hypothetical protein.
  
     0.509
Mnod_4786
PFAM: beta-lactamase domain protein; KEGG: mex:Mext_0984 beta-lactamase-like protein.
  
     0.483
Mnod_1383
PFAM: Ethanolamine ammonia-lyase light chain; KEGG: met:M446_0848 ethanolamine ammonia-lyase; Belongs to the EutC family.
  
  
 0.461
Mnod_1382
PFAM: Ethanolamine ammonia lyase large subunit; KEGG: met:M446_0847 ethanolamine ammonia lyase large subunit.
  
  
 0.434
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.