Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
Mnod_3262PFAM: GCN5-related N-acetyltransferase; KEGG: met:M446_2696 GCN5-related N-acetyltransferase. (148 aa)    
Predicted Functional Partners:
Mnod_3263
TIGRFAM: fructose-1,6-bisphosphatase, class II; PFAM: GlpX family protein; KEGG: met:M446_2697 fructose-1,6-bisphosphatase, class II.
       0.836
Mnod_3264
PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: met:M446_2698 homoserine dehydrogenase.
     
 0.742
Mnod_3265
KEGG: met:M446_2699 hypothetical protein.
 
     0.545
Mnod_6844
KEGG: mlo:mll2986 hypothetical protein.
 
 0.481
Mnod_7277
PFAM: GCN5-related N-acetyltransferase; KEGG: met:M446_6010 GCN5-related N-acetyltransferase.
 
 0.429
glyQ
TIGRFAM: glycyl-tRNA synthetase, alpha subunit; PFAM: glycyl-tRNA synthetase alpha subunit; KEGG: met:M446_2758 glycyl-tRNA synthetase, alpha subunit.
  
  
 0.424
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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