Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Mnod_3277Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: met:M446_1334 GntR family transcriptional regulator. (259 aa)    
Predicted Functional Partners:
Mnod_3278
FAD dependent oxidoreductase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: met:M446_1335 FAD dependent oxidoreductase.
  
    0.783
Mnod_3276
KEGG: met:M446_1333 hypothetical protein.
       0.768
Mnod_5666
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: xau:Xaut_0010 GntR family transcriptional regulator.
  
     0.741
Mnod_0479
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: met:M446_1711 GntR family transcriptional regulator.
  
     0.733
Mnod_1377
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: met:M446_3484 GntR family transcriptional regulator.
  
     0.729
Mnod_3699
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: met:M446_4646 GntR family transcriptional regulator.
  
     0.715
Mnod_3745
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mrd:Mrad2831_0339 GntR family transcriptional regulator.
  
     0.706
Mnod_0978
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: csa:Csal_2973 transcriptional regulator, GntR family.
  
     0.698
Mnod_4842
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: met:M446_4050 GntR family transcriptional regulator.
  
     0.692
Mnod_1461
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: oan:Oant_2937 transcriptional regulator, GntR family.
  
     0.690
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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