Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
Mnod_3295Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: met:M446_1299 AraC family transcriptional regulator. (285 aa)    
Predicted Functional Partners:
Mnod_0321
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bcj:BCAM2003 AraC family regulatory protein.
  
     0.670
Mnod_3294
PFAM: Na+/solute symporter; KEGG: met:M446_1298 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.644
Mnod_3394
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: mpo:Mpop_3990 transcriptional regulator, AraC family.
 
 
 0.537
Mnod_2287
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: cak:Caul_5148 AraC family transcriptional regulator.
 
 
 0.528
Mnod_3296
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; cyclase/dehydrase; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; carbon monoxide dehydrogenase subunit G; KEGG: met:M446_1301 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
    0.467
Mnod_1848
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: met:M446_4876 AraC family transcriptional regulator.
 
 
 0.462
Mnod_1034
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bra:BRADO0452 bifunctional glutamine amidotransferase-like/transcriptional regulator protein.
 
 
 0.452
Mnod_3299
PFAM: AMP-dependent synthetase and ligase; KEGG: met:M446_1304 AMP-dependent synthetase and ligase.
 
     0.446
Mnod_1588
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: met:M446_2777 AraC family transcriptional regulator.
  
     0.404
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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