STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_3407PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_3732 binding-protein-dependent transport systems inner membrane component. (283 aa)    
Predicted Functional Partners:
Mnod_3406
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: mex:Mext_3733 substrate-binding region of ABC-type glycine betaine transport system.
 
 0.999
Mnod_0021
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: met:M446_0018 substrate-binding region of ABC-type glycine betaine transport system.
  
 
 0.672
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
  
 0.608
ugpC
ABC transporter related; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
     
 0.561
Mnod_1412
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: met:M446_0823 ABC transporter related; Belongs to the ABC transporter superfamily.
     
 0.561
Mnod_5670
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: vei:Veis_3448 ABC transporter related; Belongs to the ABC transporter superfamily.
     
 0.561
Mnod_3408
Hypothetical protein; KEGG: bpm:BURPS1710b_1258 200 kDa antigen p200, putative.
       0.559
Mnod_5667
PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_3451 extracellular solute-binding protein, family 1.
     
 0.554
Mnod_1620
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_0478 ABC transporter related.
  
  
 0.552
Mnod_5836
PFAM: permease YjgP/YjgQ family protein; KEGG: met:M446_5098 permease YjgP/YjgQ family protein.
     
  0.540
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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