STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_3423PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr3187 ABC transporter ATP-binding protein. (237 aa)    
Predicted Functional Partners:
Mnod_3425
PFAM: inner-membrane translocator; KEGG: bja:blr3185 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.963
Mnod_3426
PFAM: inner-membrane translocator; KEGG: bja:blr3184 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.956
Mnod_3424
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr3186 ABC transporter ATP-binding protein.
 
   
0.885
Mnod_3427
KEGG: bja:blr3183 ABC transporter substrate-binding protein.
 
  
 0.875
Mnod_1242
PFAM: inner-membrane translocator; KEGG: met:M446_1977 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.847
Mnod_0333
PFAM: inner-membrane translocator; KEGG: met:M446_2269 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.838
Mnod_2025
PFAM: inner-membrane translocator; KEGG: mpo:Mpop_3556 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.838
Mnod_3962
PFAM: inner-membrane translocator; KEGG: met:M446_3841 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.831
Mnod_0066
PFAM: inner-membrane translocator; KEGG: met:M446_4764 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.829
Mnod_1546
PFAM: inner-membrane translocator; KEGG: azc:AZC_3002 ABC transport permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.827
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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