Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Mnod_3426PFAM: inner-membrane translocator; KEGG: bja:blr3184 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (300 aa)    
Predicted Functional Partners:
Mnod_3425
PFAM: inner-membrane translocator; KEGG: bja:blr3185 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
Mnod_3424
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr3186 ABC transporter ATP-binding protein.
 
    0.962
Mnod_3423
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr3187 ABC transporter ATP-binding protein.
 
  
 0.956
Mnod_3427
KEGG: bja:blr3183 ABC transporter substrate-binding protein.
 
  
 0.926
Mnod_1210
PFAM: inner-membrane translocator; KEGG: met:M446_3641 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.921
Mnod_2025
PFAM: inner-membrane translocator; KEGG: mpo:Mpop_3556 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.879
Mnod_4452
PFAM: inner-membrane translocator; KEGG: met:M446_3242 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
    0.878
Mnod_1162
ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_1796 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.873
Mnod_0224
PFAM: inner-membrane translocator; KEGG: met:M446_3167 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.849
Mnod_0223
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_3166 ABC transporter related.
 
  
 0.847
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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