STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_3452PFAM: CDP-diacylglycerol pyrophosphatase; KEGG: mrd:Mrad2831_4899 CDP-diacylglycerol diphosphatase. (263 aa)    
Predicted Functional Partners:
Mnod_1535
PFAM: phosphatidate cytidylyltransferase; KEGG: met:M446_0634 phosphatidate cytidylyltransferase; Belongs to the CDS family.
     
 0.905
Mnod_3714
TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: met:M446_2653 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.905
Mnod_5546
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: met:M446_5163 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.905
Mnod_7480
PFAM: CDP-diacylglycerol pyrophosphatase; KEGG: mrd:Mrad2831_4384 CDP-diacylglycerol diphosphatase.
  
  
 
0.905
Mnod_1496
TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: met:M446_0693 CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.903
Mnod_1297
PFAM: phospholipid/glycerol acyltransferase; KEGG: met:M446_0953 phospholipid/glycerol acyltransferase.
   
 
  0.901
Mnod_4771
KEGG: mrd:Mrad2831_5901 hypothetical protein.
  
     0.618
Mnod_3451
Hypothetical protein; KEGG: met:M446_5531 transposase.
       0.499
Mnod_6651
PFAM: beta-lactamase; KEGG: spe:Spro_0636 beta-lactamase/D-alanine carboxypeptidase.
  
     0.445
Mnod_3285
KEGG: met:M446_4896 hypothetical protein.
  
     0.436
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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