Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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Mnod_3454Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01817 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (310 aa)    
Predicted Functional Partners:
Mnod_1617
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_0480 LysR family transcriptional regulator.
  
     0.728
Mnod_3117
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ade:Adeh_2212 LysR family transcriptional regulator.
  
     0.677
Mnod_3219
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pde:Pden_4750 transcriptional regulator, LysR family.
  
     0.670
Mnod_7097
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_6203 LysR family transcriptional regulator.
  
     0.647
Mnod_3084
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb20683 putative transcriptional regulator, LysR family protein.
  
     0.641
Mnod_6838
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc1094 transcriptional regulatory DNA-binding transcription regulator protein.
  
     0.632
Mnod_0657
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_B5436 LysR family transcriptional regulator.
  
     0.631
Mnod_3652
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_2975 LysR family transcriptional regulator.
  
     0.629
Mnod_3453
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMc01816 putative oxidoreductase protein.
 
     0.625
Mnod_2343
PFAM: regulatory protein LysR; KEGG: xop:PXO_04629 transcriptional regulator.
  
     0.619
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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