STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_3462KEGG: met:M446_0302 hypothetical protein. (79 aa)    
Predicted Functional Partners:
Mnod_1636
PFAM: Peptidoglycan-binding LysM; KEGG: met:M446_0461 peptidoglycan-binding LysM.
  
   0.889
Mnod_2444
PFAM: Baseplate J family protein; KEGG: bbt:BBta_6583 putative bacteriophage protein.
   
 
 0.768
Mnod_0588
PFAM: GPW/gp25 family protein; KEGG: met:M446_4136 gpW/GP25 family protein.
   
   0.746
Mnod_0570
PFAM: late control D family protein; KEGG: met:M446_4124 late control D family protein.
   
   0.719
Mnod_7067
PFAM: SpoVR family protein; KEGG: met:M446_6238 SpoVR family protein.
   
  
 0.690
Mnod_1571
PFAM: PsiF repeat protein; KEGG: pau:PA14_64460 hypothetical protein.
   
    0.652
Mnod_7069
PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: met:M446_6236 putative serine protein kinase, PrkA.
   
    0.519
Mnod_0579
KEGG: met:M446_4130 hypothetical protein.
   
 
 0.503
Mnod_2459
KEGG: rsp:RSP_2757 hypothetical protein.
   
 
 0.503
Mnod_3863
KEGG: mca:MCA2924 hypothetical protein.
   
 
 0.503
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.