Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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Mnod_3485Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B1909 transcriptional regulator, LysR-family. (305 aa)    
Predicted Functional Partners:
Mnod_1715
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_4808 LysR family transcriptional regulator.
  
     0.666
Mnod_0820
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: nha:Nham_0847 LysR family transcriptional regulator.
  
     0.648
Mnod_3481
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reh:H16_B1905 enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
    0.539
Mnod_3483
PFAM: Thiolase; KEGG: reh:H16_B1903 probable lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
    0.539
Mnod_5996
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_5772 LysR family transcriptional regulator.
  
     0.539
Mnod_3480
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_B1908 hypothetical protein; Belongs to the CoA-transferase III family.
       0.538
Mnod_3482
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_B1904 3-oxoacyl-[acyl-carrier-protein] reductase.
       0.538
Mnod_3484
PFAM: protein of unknown function DUF35; KEGG: reh:H16_B1902 hypothetical protein.
       0.538
Mnod_2844
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_2367 LysR family transcriptional regulator.
  
     0.518
Mnod_3486
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bav:BAV1823 alpha-ketoglutarate permease.
  
    0.469
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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