STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_3550KEGG: met:M446_5960 hypothetical protein. (317 aa)    
Predicted Functional Partners:
Mnod_3552
KEGG: met:M446_5958 hypothetical protein.
 
     0.880
Mnod_3544
PFAM: putative head morphogenesis protein SPP1 gp7; KEGG: mes:Meso_1223 hypothetical protein.
 
     0.844
Mnod_6245
KEGG: met:M446_5958 hypothetical protein.
 
     0.781
Mnod_6484
KEGG: met:M446_5958 hypothetical protein.
 
     0.781
Mnod_6560
KEGG: met:M446_5958 hypothetical protein.
 
     0.781
Mnod_7001
KEGG: met:M446_5958 hypothetical protein.
 
     0.781
Mnod_3555
TIGRFAM: phage-associated protein, HI1409 family; PFAM: conserved hypothetical protein; KEGG: met:M446_5957 HI1409 family phage-associated protein.
 
     0.780
Mnod_6253
TIGRFAM: phage-associated protein, HI1409 family; PFAM: conserved hypothetical protein; KEGG: met:M446_5957 HI1409 family phage-associated protein.
 
     0.780
Mnod_6998
TIGRFAM: phage-associated protein, HI1409 family; PFAM: conserved hypothetical protein; KEGG: met:M446_5957 HI1409 family phage-associated protein.
 
     0.780
Mnod_6559
TIGRFAM: phage-associated protein, HI1409 family; PFAM: conserved hypothetical protein; KEGG: met:M446_5957 HI1409 family phage-associated protein.
 
     0.779
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.