Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Mnod_3626PFAM: regulatory protein MarR; iron dependent repressor; KEGG: met:M446_3941 DtxR family iron dependent repressor. (153 aa)    
Predicted Functional Partners:
metN
ABC transporter related; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
   
   0.738
Mnod_5583
PFAM: ABC-3 protein; KEGG: met:M446_5388 ABC-3 protein.
  
  
 0.645
Mnod_5584
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_5387 ABC transporter related.
  
  
 0.633
mntH
Mn2+/Fe2+ transporter, NRAMP family; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
 
  
 0.598
Mnod_7364
TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: met:M446_6615 signal peptidase I; Belongs to the peptidase S26 family.
   
    0.567
Mnod_0814
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: sme:SMb20213 hypothetical protein.
  
  
 0.530
Mnod_3625
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_3942 binding-protein-dependent transport systems inner membrane component.
       0.510
Mnod_3623
KEGG: met:M446_3944 extracellular solute-binding protein.
       0.507
Mnod_3624
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_3943 ABC transporter related.
       0.503
Mnod_1170
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: met:M446_1812 glutamate synthase (ferredoxin).
       0.492
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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