Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_3647PFAM: extracellular solute-binding protein family 1; KEGG: bja:bll6825 ABC transporter substrate-binding protein. (349 aa)    
Predicted Functional Partners:
Mnod_3649
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll6823 ABC transporter permease protein.
 
 
 0.969
Mnod_4262
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2477 binding-protein-dependent transport systems inner membrane component.
 
 
 0.966
Mnod_3648
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll6824 ABC transporter permease protein.
 
  
 0.935
Mnod_3646
PFAM: FAD dependent oxidoreductase; KEGG: met:M446_5527 FAD dependent oxidoreductase.
 
   
 0.911
Mnod_3644
KEGG: bpy:Bphyt_6149 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.904
Mnod_3645
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: met:M446_5528 HAD family hydrolase.
 
    0.885
Mnod_6775
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_6381 ornithine carbamoyltransferase.
 
 
 0.861
Mnod_0103
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_4741 binding-protein-dependent transport systems inner membrane component.
 
 
 0.837
Mnod_6774
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_6380 binding-protein-dependent transport systems inner membrane component.
 
  
 0.790
Mnod_0102
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_4740 binding-protein-dependent transport systems inner membrane component.
 
  
 0.777
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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