Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_3651PFAM: FAD dependent oxidoreductase; KEGG: met:M446_3636 FAD dependent oxidoreductase. (426 aa)    
Predicted Functional Partners:
dadA
FAD dependent oxidoreductase; Oxidative deamination of D-amino acids; Belongs to the DadA oxidoreductase family.
  
  
 
0.926
Mnod_0890
PFAM: aminotransferase class I and II; KEGG: bpt:Bpet4447 aspartate aminotransferase.
  
  
 0.915
Mnod_1959
PFAM: aminotransferase class I and II; KEGG: met:M446_3821 aminotransferase class I and II.
  
  
 0.913
Mnod_6396
PFAM: FAD dependent oxidoreductase; KEGG: bja:bll6812 putative dehydrogenase.
  
  
 
0.903
Mnod_7579
PFAM: aminotransferase class IV; KEGG: met:M446_6843 aminotransferase class IV.
     
 0.903
Mnod_6588
PFAM: Malate/L-lactate dehydrogenase; KEGG: met:M446_6488 malate/L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
     
 0.901
hisC
TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: met:M446_5257 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
  0.900
Mnod_3391
TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: mex:Mext_3738 sarcosine oxidase alpha subunit family protein.
  
 
 0.830
Mnod_3975
PFAM: proline racemase; KEGG: met:M446_3837 proline racemase; Belongs to the proline racemase family.
 
   
 0.679
Mnod_3966
PFAM: proline racemase; KEGG: met:M446_3837 proline racemase; Belongs to the proline racemase family.
 
   
 0.670
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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