Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_3654PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_2973 binding-protein-dependent transport systems inner membrane component. (304 aa)    
Predicted Functional Partners:
Mnod_3655
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_2972 binding-protein-dependent transport systems inner membrane component.
 
 
 0.984
Mnod_3653
PFAM: extracellular solute-binding protein family 5; KEGG: met:M446_2974 extracellular solute-binding protein.
 
 
 0.975
Mnod_3657
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: met:M446_2970 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 
 0.962
Mnod_3271
KEGG: met:M446_2705 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.920
Mnod_0487
KEGG: met:M446_1693 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.919
Mnod_0488
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_1692 binding-protein-dependent transport systems inner membrane component.
 
 
 0.900
Mnod_3269
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_2703 binding-protein-dependent transport systems inner membrane component.
 
 
 0.900
Mnod_6091
Cyclic nucleotide-binding protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_5345 binding-protein-dependent transport systems inner membrane component.
 
 
 0.899
Mnod_2916
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000558 probable oligopeptide ABC transporter, permease protein.
 
 
 0.893
Mnod_7230
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_6478 binding-protein-dependent transport systems inner membrane component.
 
 
 0.878
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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