Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_3656PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: met:M446_2971 peptidase M20. (490 aa)    
Predicted Functional Partners:
Mnod_3653
PFAM: extracellular solute-binding protein family 5; KEGG: met:M446_2974 extracellular solute-binding protein.
 
     0.937
Mnod_3655
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_2972 binding-protein-dependent transport systems inner membrane component.
 
     0.877
Mnod_3654
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_2973 binding-protein-dependent transport systems inner membrane component.
 
     0.875
Mnod_3657
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: met:M446_2970 ABC transporter related; Belongs to the ABC transporter superfamily.
       0.853
Mnod_3652
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_2975 LysR family transcriptional regulator.
 
     0.728
Mnod_3276
KEGG: met:M446_1333 hypothetical protein.
  
     0.475
Mnod_1368
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: met:M446_0873 peptidase M20.
 
     0.453
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.
  
 
 0.446
argG
PFAM: argininosuccinate synthase; KEGG: met:M446_6641 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.414
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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