Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_3685Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_0461 regulatory protein LysR; Belongs to the LysR transcriptional regulatory family. (318 aa)    
Predicted Functional Partners:
Mnod_4903
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_5095 LysR family transcriptional regulator.
  
     0.711
Mnod_3686
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: met:M446_3481 mandelate racemase/muconate lactonizing protein.
 
     0.687
Mnod_0948
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4350 LysR substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.653
Mnod_4270
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpo:Mpop_4874 transcriptional regulator, LysR family.
  
     0.649
Mnod_7247
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_6037 LysR family transcriptional regulator.
  
     0.645
Mnod_4682
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pap:PSPA7_4703 transcriptional regulator.
  
     0.622
Mnod_6838
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc1094 transcriptional regulatory DNA-binding transcription regulator protein.
  
     0.619
Mnod_0485
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_1695 LysR family transcriptional regulator.
  
     0.592
Mnod_3652
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_2975 LysR family transcriptional regulator.
  
     0.582
Mnod_2343
PFAM: regulatory protein LysR; KEGG: xop:PXO_04629 transcriptional regulator.
  
     0.568
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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