Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Mnod_3695PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: met:M446_4642 3-hydroxyacyl-CoA dehydrogenase NAD-binding. (308 aa)    
Predicted Functional Partners:
Mnod_3694
PFAM: protein of unknown function DUF849; KEGG: met:M446_4641 hypothetical protein.
 
  
 0.907
Mnod_3696
ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_4643 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
 
     0.862
Mnod_3697
PFAM: inner-membrane translocator; KEGG: met:M446_4644 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.837
Mnod_4781
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: met:M446_5280 acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.715
Mnod_5917
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: met:M446_5280 acetyl-CoA acetyltransferase.
 
 0.715
Mnod_7471
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: bid:Bind_3058 acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.709
Mnod_3980
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: rsq:Rsph17025_3940 hypothetical protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.701
Mnod_3698
PFAM: Extracellular ligand-binding receptor; KEGG: met:M446_4645 extracellular ligand-binding receptor.
       0.698
Mnod_3635
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: met:M446_3936 acyl-CoA dehydrogenase domain-containing protein.
 
 0.664
Mnod_2813
TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; KEGG: met:M446_2398 beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.657
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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