Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_3696ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_4643 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family. (840 aa)    
Predicted Functional Partners:
Mnod_3697
PFAM: inner-membrane translocator; KEGG: met:M446_4644 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.957
Mnod_3698
PFAM: Extracellular ligand-binding receptor; KEGG: met:M446_4645 extracellular ligand-binding receptor.
 
  
 0.943
Mnod_3695
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: met:M446_4642 3-hydroxyacyl-CoA dehydrogenase NAD-binding.
 
     0.862
Mnod_3694
PFAM: protein of unknown function DUF849; KEGG: met:M446_4641 hypothetical protein.
       0.819
Mnod_3243
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sit:TM1040_3254 periplasmic sensory protein associated with the TorRS two-component regulatory system.
  
 
 0.795
Mnod_4043
PFAM: regulatory protein LacI; KEGG: met:M446_4170 LacI family transcription regulator.
  
 
 0.795
Mnod_5026
PFAM: regulatory protein LacI; KEGG: met:M446_4170 LacI family transcription regulator.
  
 
 0.795
Mnod_3748
PFAM: Extracellular ligand-binding receptor; KEGG: bcs:BCAN_B0395 hypothetical protein.
 
  
 0.629
Mnod_3699
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: met:M446_4646 GntR family transcriptional regulator.
 
    0.619
Mnod_3700
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: met:M446_4647 short-chain dehydrogenase/reductase SDR.
 
   
 0.606
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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