Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_3710PFAM: gamma-glutamyltranspeptidase; KEGG: met:M446_2556 gamma-glutamyltransferase. (525 aa)    
Predicted Functional Partners:
Mnod_4485
TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: met:M446_4553 gamma-glutamyltransferase.
  
  
 
0.922
Mnod_0366
Glutamate--cysteine ligase GCS2; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
  
 
 0.918
gshB
TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase domain protein; glutathione synthetase ATP-binding; RimK domain protein ATP-grasp; KEGG: met:M446_1113 glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
    
 0.916
Mnod_4666
Glutathione-disulfide reductase; Maintains high levels of reduced glutathione.
     
 0.913
Mnod_0899
PFAM: Allophanate hydrolase subunit 1; KEGG: bcm:Bcenmc03_3056 allophanate hydrolase subunit 1.
   
 
  0.912
pepA
Peptidase M17 leucyl aminopeptidase domain protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 
 0.912
Mnod_1782
PFAM: glutathione peroxidase; KEGG: met:M446_5475 glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.911
Mnod_5332
PFAM: glutathione peroxidase; KEGG: met:M446_5025 peroxiredoxin; Belongs to the glutathione peroxidase family.
     
 0.911
Mnod_6782
PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: met:M446_6389 leucyl aminopeptidase; Belongs to the peptidase M17 family.
     
 0.911
Mnod_5475
TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: met:M446_0267 aminopeptidase N.
   
 
 0.903
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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