STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_3755MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; HWE histidine kinase; PAS fold-4 domain protein; KEGG: met:M446_6211 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor. (1063 aa)    
Predicted Functional Partners:
Mnod_1691
CheA signal transduction histidine kinase; PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: met:M446_4838 CheA signal transduction histidine kinase.
 
 0.999
Mnod_5453
CheA signal transduction histidine kinase; PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: met:M446_0244 CheA signal transduction histidine kinase.
 
 0.999
Mnod_0766
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: met:M446_2049 CheA signal transduction histidine kinase.
 
 0.998
Mnod_0761
PFAM: CheW domain protein; KEGG: met:M446_2054 CheW protein.
 
 
 0.988
Mnod_1692
PFAM: CheW domain protein; KEGG: met:M446_4837 CheW protein.
 
 
 0.986
Mnod_0760
PFAM: chemotaxis sensory transducer; KEGG: met:M446_2055 methyl-accepting chemotaxis sensory transducer.
 
 0.978
Mnod_5449
PFAM: CheW domain protein; KEGG: met:M446_0240 CheW protein.
 
 
 0.978
Mnod_3496
PFAM: chemotaxis sensory transducer; KEGG: mpo:Mpop_3344 methyl-accepting chemotaxis sensory transducer.
 
 0.977
Mnod_5958
PFAM: chemotaxis sensory transducer; KEGG: met:M446_5211 methyl-accepting chemotaxis sensory transducer.
 
 0.977
Mnod_5243
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mpo:Mpop_2047 methyl-accepting chemotaxis sensory transducer.
 
 0.975
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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