Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Mnod_3831Putative phage repressor; PFAM: peptidase S24 and S26 domain protein; KEGG: mlo:mll8500 repressor protein C; Belongs to the peptidase S24 family. (246 aa)    
Predicted Functional Partners:
Mnod_0573
KEGG: met:M446_4127 TP901 family phage tail tape measure protein.
  
    0.705
Mnod_3832
KEGG: rpc:RPC_4155 hypothetical protein.
       0.567
Mnod_4350
PFAM: integrase family protein; KEGG: rpa:RPA4549 phage integrase.
 
    0.558
Mnod_1636
PFAM: Peptidoglycan-binding LysM; KEGG: met:M446_0461 peptidoglycan-binding LysM.
  
     0.544
Mnod_3145
PFAM: protein of unknown function DUF1275; KEGG: bra:BRADO5122 hypothetical protein.
  
     0.534
Mnod_4092
KEGG: smd:Smed_1911 hypothetical protein.
  
    0.502
Mnod_0570
PFAM: late control D family protein; KEGG: met:M446_4124 late control D family protein.
  
  
 0.501
Mnod_0588
PFAM: GPW/gp25 family protein; KEGG: met:M446_4136 gpW/GP25 family protein.
  
    0.495
Mnod_4247
KEGG: smd:Smed_1911 hypothetical protein.
  
    0.491
Mnod_6273
KEGG: mag:amb0461 hypothetical protein.
  
    0.475
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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