Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_3863KEGG: mca:MCA2924 hypothetical protein. (126 aa)    
Predicted Functional Partners:
Mnod_0570
PFAM: late control D family protein; KEGG: met:M446_4124 late control D family protein.
 
 
 0.950
Mnod_0588
PFAM: GPW/gp25 family protein; KEGG: met:M446_4136 gpW/GP25 family protein.
 
 
 0.950
Mnod_3864
KEGG: wpi:WP0328 putative phage related protein.
 
     0.950
Mnod_0583
TIGRFAM: phage tail protein I; PFAM: tail protein I; KEGG: met:M446_4134 phage tail protein I.
 
 
 0.948
Mnod_3858
PFAM: terminase GpA; KEGG: ecx:EcHS_A2094 phage terminase large subunit (GpA).
 
  
 0.947
Mnod_3867
KEGG: nwi:Nwi_0802 hypothetical protein.
 
     0.933
Mnod_0578
PFAM: major tail tube protein; KEGG: met:M446_4129 major tail tube protein.
 
 
 0.932
Mnod_3866
KEGG: nwi:Nwi_0805 hypothetical protein.
 
     0.924
Mnod_3860
TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda; KEGG: sml:Smlt1869 putative portal protein B (gpb) (minor capsid protein B) [contains: protein B*].
 
  
 0.907
Mnod_0598
PFAM: terminase GpA; KEGG: syf:Synpcc7942_0731 putative phage terminase large subunit.
 
  
 0.881
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.