STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_3866KEGG: nwi:Nwi_0805 hypothetical protein. (117 aa)    
Predicted Functional Partners:
Mnod_3867
KEGG: nwi:Nwi_0802 hypothetical protein.
 
     0.950
Mnod_3863
KEGG: mca:MCA2924 hypothetical protein.
 
     0.924
Mnod_3864
KEGG: wpi:WP0328 putative phage related protein.
 
     0.904
Mnod_3858
PFAM: terminase GpA; KEGG: ecx:EcHS_A2094 phage terminase large subunit (GpA).
 
     0.896
Mnod_3860
TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda; KEGG: sml:Smlt1869 putative portal protein B (gpb) (minor capsid protein B) [contains: protein B*].
 
     0.892
Mnod_5767
KEGG: nwi:Nwi_0802 hypothetical protein.
 
     0.789
Mnod_3869
KEGG: nwi:Nwi_0801 hypothetical protein.
 
     0.785
Mnod_5762
KEGG: nwi:Nwi_0801 hypothetical protein.
 
     0.785
Mnod_6664
KEGG: nwi:Nwi_0801 hypothetical protein.
 
     0.785
Mnod_3870
KEGG: nwi:Nwi_0800 hypothetical protein.
 
     0.784
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.