STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_3886KEGG: rpt:Rpal_3338 hypothetical protein. (138 aa)    
Predicted Functional Partners:
Mnod_3877
Hypothetical protein.
       0.773
Mnod_3878
PFAM: minor tail family protein; KEGG: mes:Meso_1883 phage minor tail.
       0.773
Mnod_3879
TIGRFAM: phage minor tail protein L; PFAM: minor tail protein L; KEGG: bph:Bphy_3385 phage minor tail protein L.
       0.773
Mnod_3880
PFAM: NLP/P60 protein; KEGG: rso:RSc1695 phage HK022 GP19-like protein.
       0.773
Mnod_3881
PFAM: lambda tail assembly I; KEGG: rso:RSc1696 phage HK022 GP20-like protein.
       0.773
Mnod_3882
PFAM: Fibronectin type III domain protein; KEGG: bmj:BMULJ_04620 bacteriophage host specificity protein J.
       0.773
Mnod_3883
Hypothetical protein.
       0.773
Mnod_3884
Hypothetical protein.
       0.773
Mnod_3885
Hypothetical protein.
       0.773
Mnod_3887
Hypothetical protein.
       0.773
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.