Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_3955PFAM: FAD dependent oxidoreductase; KEGG: met:M446_3847 FAD dependent oxidoreductase. (411 aa)    
Predicted Functional Partners:
Mnod_3391
TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: mex:Mext_3738 sarcosine oxidase alpha subunit family protein.
  
 
 0.830
Mnod_3975
PFAM: proline racemase; KEGG: met:M446_3837 proline racemase; Belongs to the proline racemase family.
 
   
 0.709
Mnod_3966
PFAM: proline racemase; KEGG: met:M446_3837 proline racemase; Belongs to the proline racemase family.
 
   
 0.701
Mnod_3956
PFAM: Aldehyde Dehydrogenase; KEGG: met:M446_3846 aldehyde dehydrogenase.
  
    0.506
Mnod_3392
TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: mrd:Mrad2831_2486 sarcosine oxidase delta subunit family protein.
  
 
 0.488
Mnod_7392
PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: met:M446_6648 FMN-dependent alpha-hydroxy acid dehydrogenase.
  
 
 0.459
thiG
Thiazole biosynthesis family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
  
 0.430
Mnod_3957
PFAM: dihydrodipicolinate synthetase; KEGG: met:M446_3845 dihydrodipicolinate synthetase.
 
     0.403
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.