Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_3962PFAM: inner-membrane translocator; KEGG: met:M446_3841 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (295 aa)    
Predicted Functional Partners:
Mnod_3963
PFAM: inner-membrane translocator; KEGG: met:M446_3840 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.996
Mnod_3960
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_3843 ABC transporter related.
 
  
 0.967
Mnod_3961
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_3842 ABC transporter related.
  
 0.964
Mnod_3964
PFAM: Extracellular ligand-binding receptor; KEGG: met:M446_3839 extracellular ligand-binding receptor.
 
  
 0.946
Mnod_6586
PFAM: inner-membrane translocator; KEGG: met:M446_6490 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.879
Mnod_0332
PFAM: inner-membrane translocator; KEGG: met:M446_2270 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.878
Mnod_1163
PFAM: inner-membrane translocator; KEGG: met:M446_1797 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.875
Mnod_1547
PFAM: inner-membrane translocator; KEGG: azc:AZC_3001 ABC transport permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.871
Mnod_0334
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_2268 ABC transporter related.
  
 0.868
Mnod_1548
PFAM: Extracellular ligand-binding receptor; KEGG: azc:AZC_3000 ABC transport solute-binding protein.
 
  
 0.868
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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