Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_4026PFAM: polysaccharide deacetylase; KEGG: mlo:mlr6175 chitooligosaccharide deacetylase, nodulation protein NodB. (219 aa)    
Predicted Functional Partners:
Mnod_4027
PFAM: glycosyl transferase family 2; chitin synthase; KEGG: rec:RHECIAT_PB0000316 N-acetylglucosaminyltransferase protein.
  
 0.921
nodA
Nodulation protein A NodA; N-acyltransferase required for nodulation. Acts in the production of a small, heat-stable compound (Nod) that stimulates mitosis in various plant protoplasts; Belongs to the NodA family.
     
 0.878
Mnod_4024
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_3833 LysR family transcriptional regulator.
   
   0.563
Mnod_6372
KEGG: met:M446_5864 glycosyl transferase family protein.
  
  
 0.412
Mnod_4031
KEGG: smd:Smed_6196 NodH sulfotransferase.
     
 0.403
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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