STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4065Hypothetical protein. (68 aa)    
Predicted Functional Partners:
Mnod_4064
Hypothetical protein.
       0.565
Mnod_4063
Hypothetical protein; KEGG: eugene3.00111074.
       0.447
Mnod_4062
Hypothetical protein.
       0.408
Mnod_4052
KEGG: ypp:YPDSF_2573 cell envelope integrity inner membrane protein TolA.
       0.405
Mnod_4053
KEGG: rpt:Rpal_3338 hypothetical protein.
       0.405
Mnod_4054
Hypothetical protein.
       0.405
Mnod_4055
Hypothetical protein.
       0.405
Mnod_4056
Hypothetical protein.
       0.405
Mnod_4057
PFAM: Fibronectin type III domain protein; KEGG: rso:RSc1698 bacteriophage protein.
       0.405
Mnod_4058
PFAM: lambda tail assembly I; KEGG: rpt:Rpal_3976 putative phage HK022 GP20-related protein.
       0.405
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.