Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4078TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: ppf:Pput_4113 HK97 family phage portal protein. (457 aa)    
Predicted Functional Partners:
Mnod_4080
PFAM: peptidase U35 phage prohead HK97; KEGG: ppf:Pput_4115 peptidase U35, phage prohead HK97.
 
   
 0.909
Mnod_4081
PFAM: Terminase; KEGG: oan:Oant_0238 phage terminase.
 
   
 0.903
Mnod_7329
TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: pmy:Pmen_3970 HK97 family phage major capsid protein.
 
 
 0.869
Mnod_1998
TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: cth:Cthe_2866 phage major capsid protein, HK97.
 
 
 0.839
Mnod_1994
PFAM: Terminase; KEGG: sit:TM1040_1671 phage terminase.
 
   
 0.788
Mnod_2614
PFAM: Terminase; KEGG: sit:TM1040_1671 phage terminase.
 
   
 0.788
Mnod_4281
PFAM: Terminase; KEGG: sit:TM1040_1671 phage terminase.
 
   
 0.788
Mnod_5068
PFAM: Terminase; KEGG: oan:Oant_0238 phage terminase.
 
   
 0.787
Mnod_7332
PFAM: Terminase; KEGG: ppw:PputW619_1335 terminase.
 
   
 0.787
Mnod_5067
PFAM: peptidase U35 phage prohead HK97; KEGG: ppf:Pput_4115 peptidase U35, phage prohead HK97.
 
   
 0.783
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.