STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4143PFAM: protein of unknown function DUF1467; KEGG: met:M446_4407 hypothetical protein. (111 aa)    
Predicted Functional Partners:
Mnod_4142
TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: met:M446_4406 methylmalonyl-CoA epimerase.
       0.834
Mnod_4141
PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: met:M446_4405 beta-lactamase domain-containing protein.
       0.708
Mnod_4757
KEGG: met:M446_4248 hypothetical protein.
  
     0.514
Mnod_4140
TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: met:M446_4404 biotin--acetyl-CoA-carboxylase ligase.
       0.512
nuoN
Proton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.
       0.504
Mnod_4138
TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: met:M446_4402 proton-translocating NADH-quinone oxidoreductase, chain M.
       0.500
Mnod_0191
Putative chemotaxis phosphatase, CheZ; KEGG: met:M446_3649 hypothetical protein.
  
     0.498
Mnod_0715
KEGG: met:M446_1120 hypothetical protein.
  
     0.472
Mnod_4137
TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); KEGG: met:M446_4401 proton-translocating NADH-quinone oxidoreductase, chain L.
       0.470
Mnod_5911
KEGG: met:M446_5286 hypothetical protein.
  
     0.459
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.