Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Mnod_2561 | Mnod_2821 | PFAM: peptidase A24A prepilin type IV; KEGG: met:M446_2386 peptidase A24A prepilin type IV. | KEGG: met:M446_2390 hypothetical protein. | 0.808 |
Mnod_2561 | Mnod_2823 | PFAM: peptidase A24A prepilin type IV; KEGG: met:M446_2386 peptidase A24A prepilin type IV. | KEGG: met:M446_2388 hypothetical protein. | 0.827 |
Mnod_2561 | Mnod_2829 | PFAM: peptidase A24A prepilin type IV; KEGG: met:M446_2386 peptidase A24A prepilin type IV. | KEGG: met:M446_2382 response regulator receiver protein. | 0.866 |
Mnod_2561 | Mnod_3781 | PFAM: peptidase A24A prepilin type IV; KEGG: met:M446_2386 peptidase A24A prepilin type IV. | KEGG: rpc:RPC_3708 hypothetical protein. | 0.821 |
Mnod_2561 | Mnod_4163 | PFAM: peptidase A24A prepilin type IV; KEGG: met:M446_2386 peptidase A24A prepilin type IV. | PFAM: type IV pilus assembly PilZ; KEGG: met:M446_4427 type IV pilus assembly PilZ. | 0.772 |
Mnod_2561 | Mnod_4936 | PFAM: peptidase A24A prepilin type IV; KEGG: met:M446_2386 peptidase A24A prepilin type IV. | KEGG: met:M446_2648 hypothetical protein. | 0.720 |
Mnod_2561 | Mnod_5126 | PFAM: peptidase A24A prepilin type IV; KEGG: met:M446_2386 peptidase A24A prepilin type IV. | PFAM: protein of unknown function DUF1457; KEGG: met:M446_3233 hypothetical protein. | 0.579 |
Mnod_2561 | Mnod_6795 | PFAM: peptidase A24A prepilin type IV; KEGG: met:M446_2386 peptidase A24A prepilin type IV. | PFAM: Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: met:M446_6390 TPR repeat-containing protein. | 0.816 |
Mnod_2821 | Mnod_2561 | KEGG: met:M446_2390 hypothetical protein. | PFAM: peptidase A24A prepilin type IV; KEGG: met:M446_2386 peptidase A24A prepilin type IV. | 0.808 |
Mnod_2821 | Mnod_2823 | KEGG: met:M446_2390 hypothetical protein. | KEGG: met:M446_2388 hypothetical protein. | 0.908 |
Mnod_2821 | Mnod_2825 | KEGG: met:M446_2390 hypothetical protein. | PFAM: peptidase A24A prepilin type IV; KEGG: met:M446_2386 peptidase A24A prepilin type IV. | 0.844 |
Mnod_2821 | Mnod_2829 | KEGG: met:M446_2390 hypothetical protein. | KEGG: met:M446_2382 response regulator receiver protein. | 0.877 |
Mnod_2821 | Mnod_3781 | KEGG: met:M446_2390 hypothetical protein. | KEGG: rpc:RPC_3708 hypothetical protein. | 0.799 |
Mnod_2821 | Mnod_3791 | KEGG: met:M446_2390 hypothetical protein. | PFAM: peptidase A24A prepilin type IV; KEGG: nwi:Nwi_0303 peptidase A24A, prepilin type IV. | 0.799 |
Mnod_2821 | Mnod_4163 | KEGG: met:M446_2390 hypothetical protein. | PFAM: type IV pilus assembly PilZ; KEGG: met:M446_4427 type IV pilus assembly PilZ. | 0.761 |
Mnod_2821 | Mnod_4936 | KEGG: met:M446_2390 hypothetical protein. | KEGG: met:M446_2648 hypothetical protein. | 0.518 |
Mnod_2821 | Mnod_5126 | KEGG: met:M446_2390 hypothetical protein. | PFAM: protein of unknown function DUF1457; KEGG: met:M446_3233 hypothetical protein. | 0.427 |
Mnod_2821 | Mnod_6795 | KEGG: met:M446_2390 hypothetical protein. | PFAM: Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: met:M446_6390 TPR repeat-containing protein. | 0.790 |
Mnod_2823 | Mnod_2561 | KEGG: met:M446_2388 hypothetical protein. | PFAM: peptidase A24A prepilin type IV; KEGG: met:M446_2386 peptidase A24A prepilin type IV. | 0.827 |
Mnod_2823 | Mnod_2821 | KEGG: met:M446_2388 hypothetical protein. | KEGG: met:M446_2390 hypothetical protein. | 0.908 |
page 1 of 6