Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4176PFAM: DoxX family protein; KEGG: met:M446_4441 DoxX family protein. (129 aa)    
Predicted Functional Partners:
Mnod_1107
PFAM: DoxX family protein; KEGG: met:M446_2136 DoxX family protein.
  
     0.635
Mnod_4177
KEGG: met:M446_4442 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
       0.543
Mnod_4175
PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: met:M446_4440 peptidase S1 and S6 chymotrypsin/Hap.
   
   0.460
Mnod_4694
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_0920 ATPase, P-type (transporting), HAD superfamily, subfamily IC.
   
  0.450
Mnod_5730
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_0920 ATPase, P-type (transporting), HAD superfamily, subfamily IC.
   
  0.450
Mnod_6168
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mma:MM_1461 cation-transporting ATPase.
   
  0.450
Mnod_4178
PFAM: Fe-S metabolism associated SufE; KEGG: met:M446_4443 Fe-S metabolism associated SufE.
       0.444
Mnod_6559
TIGRFAM: phage-associated protein, HI1409 family; PFAM: conserved hypothetical protein; KEGG: met:M446_5957 HI1409 family phage-associated protein.
  
     0.439
Mnod_6998
TIGRFAM: phage-associated protein, HI1409 family; PFAM: conserved hypothetical protein; KEGG: met:M446_5957 HI1409 family phage-associated protein.
  
     0.410
Mnod_3555
TIGRFAM: phage-associated protein, HI1409 family; PFAM: conserved hypothetical protein; KEGG: met:M446_5957 HI1409 family phage-associated protein.
  
     0.408
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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