STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4191PFAM: carbon starvation protein CstA; KEGG: met:M446_2942 carbon starvation protein CstA. (688 aa)    
Predicted Functional Partners:
Mnod_4190
PFAM: protein of unknown function DUF466; KEGG: met:M446_2943 hypothetical protein.
 
  
 0.990
Mnod_4192
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: met:M446_2941 two component LuxR family transcriptional regulator.
  
    0.489
Mnod_0067
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_4765 ABC transporter related.
   
  
 0.477
Mnod_3696
ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_4643 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
   
  
 0.465
Mnod_0982
Hypothetical protein; KEGG: mxa:MXAN_6252 glyoxalase family protein.
  
    0.452
Mnod_4453
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: met:M446_3241 glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.452
Mnod_3243
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sit:TM1040_3254 periplasmic sensory protein associated with the TorRS two-component regulatory system.
   
  
 0.426
Mnod_4043
PFAM: regulatory protein LacI; KEGG: met:M446_4170 LacI family transcription regulator.
   
  
 0.426
Mnod_5026
PFAM: regulatory protein LacI; KEGG: met:M446_4170 LacI family transcription regulator.
   
  
 0.426
Mnod_3147
PFAM: short chain fatty acid transporter; KEGG: met:M446_4736 short chain fatty acid transporter.
  
     0.403
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.