STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4262PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2477 binding-protein-dependent transport systems inner membrane component. (593 aa)    
Predicted Functional Partners:
Mnod_4263
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: reh:H16_B1829 ABC-type transporter, ATPase component: POPT family; Belongs to the ABC transporter superfamily.
 
 
 0.997
Mnod_4264
PFAM: extracellular solute-binding protein family 1; KEGG: azc:AZC_2475 extracellular solute-binding protein.
 
 
 0.991
Mnod_6773
KEGG: met:M446_6379 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.990
Mnod_3644
KEGG: bpy:Bphyt_6149 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.989
Mnod_0100
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: met:M446_4738 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 
 0.981
Mnod_4949
Extracellular solute-binding protein family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
 0.980
Mnod_6370
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: met:M446_5862 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 
 0.977
Mnod_3647
PFAM: extracellular solute-binding protein family 1; KEGG: bja:bll6825 ABC transporter substrate-binding protein.
 
 
 0.966
Mnod_0101
KEGG: met:M446_4739 ABC transporter substrate-binding protein.
  
 
 0.924
Mnod_0103
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_4741 binding-protein-dependent transport systems inner membrane component.
 
 
 0.862
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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