STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4264PFAM: extracellular solute-binding protein family 1; KEGG: azc:AZC_2475 extracellular solute-binding protein. (359 aa)    
Predicted Functional Partners:
Mnod_4262
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2477 binding-protein-dependent transport systems inner membrane component.
 
  
 0.988
Mnod_4263
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: reh:H16_B1829 ABC-type transporter, ATPase component: POPT family; Belongs to the ABC transporter superfamily.
 
  
 0.915
Mnod_3649
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll6823 ABC transporter permease protein.
 
  
 0.823
Mnod_4261
PFAM: FAD dependent oxidoreductase; KEGG: rso:RSc0507 amino acid dehydrogenase transmembrane protein.
 
   
 0.797
Mnod_3648
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll6824 ABC transporter permease protein.
 
  
 0.725
Mnod_6774
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_6380 binding-protein-dependent transport systems inner membrane component.
 
  
 0.693
Mnod_6775
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_6381 ornithine carbamoyltransferase.
 
  
 0.677
Mnod_0102
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_4740 binding-protein-dependent transport systems inner membrane component.
  
  
 0.643
Mnod_3644
KEGG: bpy:Bphyt_6149 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.635
Mnod_0103
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_4741 binding-protein-dependent transport systems inner membrane component.
  
  
 0.634
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.