STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4300KEGG: ace:Acel_1724 ribonucleoside-diphosphate reductase, alpha subunit. (135 aa)    
Predicted Functional Partners:
Mnod_4299
KEGG: dde:Dde_2569 hypothetical protein.
       0.773
Mnod_4301
Hypothetical protein.
       0.773
Mnod_4298
PFAM: protein of unknown function DUF847; KEGG: bcs:BCAN_A1001 hypothetical protein.
       0.523
Mnod_4292
KEGG: mpo:Mpop_5452 hypothetical protein.
       0.459
Mnod_4293
PFAM: conserved hypothetical protein; KEGG: met:M446_5969 hypothetical protein.
       0.459
Mnod_4294
PFAM: conserved hypothetical protein; KEGG: met:M446_5970 hypothetical protein.
       0.459
Mnod_4295
TIGRFAM: phage cell wall peptidase, NlpC/P60 family; PFAM: NLP/P60 protein; KEGG: met:M446_5974 NlpC/P60 family phage cell wall peptidase.
       0.459
Mnod_4296
KEGG: met:M446_5975 gene transfer agent (GTA) like protein.
       0.459
Mnod_4297
KEGG: mpo:Mpop_1413 hypothetical protein.
       0.459
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.