STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4312KEGG: met:M446_1477 hypothetical protein. (111 aa)    
Predicted Functional Partners:
Mnod_4313
KEGG: met:M446_1476 putative transposase protein.
 
     0.868
Mnod_0853
KEGG: met:M446_5532 hypothetical protein.
  
     0.697
Mnod_0633
Hypothetical protein; KEGG: met:M446_5531 transposase.
  
     0.666
Mnod_2244
Hypothetical protein; KEGG: met:M446_5531 transposase.
  
     0.666
Mnod_6173
Hypothetical protein; KEGG: met:M446_5531 transposase.
  
     0.666
Mnod_6406
Hypothetical protein; KEGG: met:M446_5531 transposase.
  
     0.666
Mnod_6835
Hypothetical protein; KEGG: met:M446_5531 transposase.
  
     0.666
Mnod_5010
Transposase; KEGG: met:M446_5531 transposase.
  
     0.658
Mnod_0557
PFAM: transposase IS66; KEGG: met:M446_5531 transposase.
  
     0.657
Mnod_3166
Hypothetical protein; KEGG: met:M446_5531 transposase.
  
     0.643
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.